polars-bio
Tools
Python library for blazing-fast genomic interval operations and genomic file formats I/O on Polars DataFrames
- Repository
- github.com/biodatageeks/polars-bio
Source attribution
- Awesome Bioinformatics — github.com/biodatageeks/polars-bio
Related resources
A Python script that converts positional information from a SAM dataset into interval format with 0-based start and 1-based end. CIGAR string of SAM format is used to compute the end coordinate.
Python wrapper for [bedtools](https://github.com/arq5x/bedtools).