Find open-source science resources

Cross-domain directory aggregating tools, AI models, datasets, and research resources from bio.tools, Bioconductor, HuggingFace, curated GitHub awesome-lists, and more.

12 of 5,674 resources

Create an index on a compressed text file.

Write-once-read-many table for large datasets.

Sort genomic files according to a specified order.

Fast FASTQ filtering by matching reads against one or more regex patterns.

A wee tool for random access into BGZF files.

Easily submitting PBS jobs with script template. Multiple input files supported.

Another cross-platform, efficient, practical and pretty CSV/TSV toolkit.

Utilities for working with CSV/Tab-delimited files.

Syntax Highlighting for Computational Biology file formats (SAM, VCF, GTF, FASTA, PDB, etc...) in vim/less/gedit/sublime.

Modular and universal bioinformatics, Bionode provides pipeable UNIX command line tools and JavaScript APIs for bioinformatics analysis workflows.

Git repo of useful single line commands.