Find open-source science resources
Cross-domain directory aggregating tools, AI models, datasets, and research resources from bio.tools, Bioconductor, HuggingFace, curated GitHub awesome-lists, and more.
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12 of 5,674 resources
Create an index on a compressed text file.
Write-once-read-many table for large datasets.
Table file index.
Sort genomic files according to a specified order.
Fast FASTQ filtering by matching reads against one or more regex patterns.
A wee tool for random access into BGZF files.
Easily submitting PBS jobs with script template. Multiple input files supported.
Another cross-platform, efficient, practical and pretty CSV/TSV toolkit.
Utilities for working with CSV/Tab-delimited files.
Syntax Highlighting for Computational Biology file formats (SAM, VCF, GTF, FASTA, PDB, etc...) in vim/less/gedit/sublime.
Modular and universal bioinformatics, Bionode provides pipeable UNIX command line tools and JavaScript APIs for bioinformatics analysis workflows.
Git repo of useful single line commands.