SAMstat

BAM File Utilities

Displaying sequence statistics for next-generation sequencing.

Source attribution

  • Awesome Bioinformaticsgithub.com/timolassmann/samstat

Related resources

Collection of tools for working with BAM files.

Automate common SAM & BAM conversions.

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing.

Fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs.

Telseq is a tool for estimating telomere length from whole genome sequence data.