regionReport
Generate HTML or PDF reports to explore a set of regions such as the results from annotation-agnostic expression analysis of RNA-seq data at base-pair resolution performed by derfinder. You can also create reports for DESeq2 or edgeR results.
README
regionReport Generate HTML reports for a set of regions such as those from derfinder results or any other pipeline that defines a set of genomic regions. Check the documentation for derfinderReport() for an example on how to create the necessary input files and generating the HTML report for derfinder results. Or use: Similarly, check renderReport() for an example of a general report, or use: For DESeq2 or edgeR results check DESeq2Report() and edgeReport(). Documentation For more information…
- Repository
- github.com/leekgroup/regionreport
Source attribution
- GitHub — github.com/leekgroup/regionreport
- Bioconductor — regionReport
Related resources
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