regioneReloaded
RegioneReloaded is a package that allows simultaneous analysis of associations between genomic region sets, enabling clustering of data and the creation of ready-to-publish graphs. It takes over and expands on all the features of its predecessor regioneR. It also incorporates a strategy to improve p-value calculations and normalize z-scores coming from multiple analysis to allow for their direct comparison. RegioneReloaded builds upon regioneR by adding new plotting functions for obtaining publication-ready graphs.
- Repository
- github.com/rmalinverni/regionereload
Source attribution
- Bioconductor — regioneReloaded
Related resources
regioneR offers a statistical framework based on customizable permutation tests to assess the association between genomic region sets and other genomic features.
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