rBiopaxParser
Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.
README
rBiopaxParser Parses BioPax files of Level 2 and Level 3 and represents them in R. https://github.com/frankkramer-lab/rBiopaxParser More concretely, rBiopaxParser: Can download Biopax data from online resources Parses Biopax owl files Features many functions to select, add, modify and remove from the parsed Biopax models Can produce regulatory graphs from Biopax pathway data and offers functions to merge, diff and transform these graphs in various ways Visualization functions to layout ina a…
- Repository
- github.com/frankkramer-lab/rbiopaxparser
Source attribution
- GitHub — github.com/frankkramer-lab/rbiopaxparser
- Bioconductor — rBiopaxParser
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