flowWorkspace

ImmunoOncology
R
AGPL-3.0-only

This package is designed to facilitate comparison of automated gating methods against manual gating done in flowJo. This package allows you to import basic flowJo workspaces into BioConductor and replicate the gating from flowJo using the flowCore functionality. Gating hierarchies, groups of samples, compensation, and transformation are performed so that the output matches the flowJo analysis.

Source attribution

  • BioconductorflowWorkspace

Related resources

This package is designed to facilitate the automated gating methods in sequential way to mimic the manual gating strategy.

This package provides the core data structure and API to represent and interact with the gated cytometry data.

Uses platform-specific implemenations of the GatingML2.0 standard to exchange gated cytometry data with other software platforms.

353 months ago
HTML
AGPL-3.0

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flowWorkspace · Open Science Index