ChIP-seq analysis notes from Tommy Tang
ChIP-Seq
Resources on ChIP-seq data which include papers, methods, links to software, and analysis.
Source attribution
- Awesome Bioinformatics — github.com/crazyhottommy/chip-seq-analysis
Related resources
Identifiers in the GTN correspond to training materials in various formats (markdown, slides, video). The users can apply learned concepts directly within the framework via galaxy workflows.
Implement the BETA algorithm for infering direct target genes from DNA-binding and perturbation expression data Wang et al. (2013) <doi: 10.1038/nprot.2013.150>. Extend the algorithm to predict the combined function of two DNA-binding elements from comprable binding and expression data.