AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data.
README
AfterQC Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data AfterQC can simply go through all fastq files in a folder and then output three folders: good , bad and QC folders, which contains good reads, bad reads and the QC results of each fastq file/pair. Currently it supports processing data from HiSeq 2000/2500/3000/4000, Nextseq 500/550, MiniSeq...and other Illumina 1.8 or newer formats The author has reimplemented this tool in C++ with multithreading support to…
- Repository
- github.com/opengene/afterqc
Source attribution
- GitHub — github.com/opengene/afterqc
- Awesome Bioinformatics — github.com/opengene/afterqc
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