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Cross-domain directory aggregating tools, AI models, datasets, and research resources from bio.tools, Bioconductor, HuggingFace, curated GitHub awesome-lists, and more.
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The ontology of Cerrado wood plant dynamics was created in order to represent the set of concepts about the dynamics, that is, changes over time of the wood vegetation structure, of Cerrado. Ccon describes the main parameters used to measure the changes, such as mortality rate and recruitment rate. The Ccon is an OWL2 ontology according to the W3C recommendations [6], developed to represent the scientific knowledge about vegetation ecology focused to describe the dynamics of wood plants in the Brazilian Cerrado Domain. This ontology will be part of the GeoLinked Data Ontology network to enrich the web of data with geospatial information of the Cerrado Biome, especially with regard the wood plant dynamics. It aims to store data and collect information about biodiversity, composition and wood plant dynamics, to manage, integrate and query data about Cerrado plant community, and search for changes in Cerrado species populations over time. An interesting example can be the possibility of data integration from different scientific studies over different locations. Once the data available on line of studies carried out in different places can be integrated, geolocated, linked with qualitative models and, finally, inferences can be performed. [from homepage]
Datasets around different cancer cell lines generated by the Broad Institute and Novartis
A precursor that was later replaced with the Creative Commons Rights Expression Language (ccREL)
The Creative Commons Rights Expression Language (ccREL) lets you describe copyright licenses in RDF. For more information on describing licenses in RDF and attaching those descriptions to digital works, see [ccREL](https://wiki.creativecommons.org/CC_REL) in the [Creative Commons wiki](https://wiki.creativecommons.org/).
CBA: http://www.cba.ac.cn/ and the Shanghai Institutes for Biological Sciences (SIBS at http://www.sibs.ac.cn/) provide EBI with citation data not available in MEDLINE.
Functional families of proteins, which are a subcategory of superfamilies in CATH
One of the 23 stages of embryo development
Research and learning in agriculture, the environment and the applied life sciences
A vocabulary about resources, similar to bioregistry.schema, venn, idot, etc.
Information for ligand groups (chemical classes).
Information for ligands in the BRENDA database.
The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) annotates features onto specific genomic sequences, such as gene/protein families and their functional impacts. This record represents a sample-specific genome.
The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) annotates features onto specific genomic sequences, such as gene/protein families and their functional impacts
Database of biopesticides maintained by the University of Hertfordshire
terms approved for use by BODC to describe the measurement units for data held in its repositories.
The NMR Restraints Grid contains the original NMR data as collected for over 2500 protein and nucleic acid structures with corresponding PDB entries. In addition to the original restraints, most of the distance, dihedral angle and RDC restraint data (>85%) were parsed, and those in over 500 entries were converted and filtered. The converted and filtered data sets constitute the DOCR and FRED databases respectively.